Custom Sequence MicroRNA Recognition Elements Prediction Tool
MREdictorCS is an highly accurate method for the identification of bona-fide microRNAs
targets within mammalian genes.
Main improvements introduced by this method, compared to state-of-the-art algorithms, is the modeling of the
microRNA-target interaction as a two step reaction of duplex nucleation at the seed level, followed by an extended
pairing of the 3'-tail, and the employement of the Pumilio RNA binding proteins signature to evaluate the
accessibility of targets residing within locally stable secondary structures of the target 3'-UTR.
MREdictorCS, allows to input a custom FASTA sequence to perform the prediction.
Actually only 1 sequence at a time is supported.
MREdictorCS - Query form